SIGKDD

ACM Special Interest Group on Knowledge Discovery and Data Mining

December 2003, Volume 5, Issue 2

Editor-In-Chief	Associate Editors	Guest Editors
Sunita Sarawagi I.I.T. Bombay sunita at iitb.ac.in	Paul Bradley Apollo Data Technologies paul at apollodatatech.com	Gregory Piatetsky-Shapiro KDnuggets U. Mass Lowell gregory at kdnuggets.com
	Usama Fayyad DMX Group fayyad at dmxgroup.com	Pablo Tamayo MIT Broad Institute tamayo at broad.mit.edu

Introduction

Usama M. Fayyad

Articles on Microarray Data Mining

Microarray Data Mining: Facing the Challenges

1

Gregory Piatetsky-Shapiro and Pablo Tamayo

A Novel Approach to Determine Normal Variation in Gene Expression Data

6

V. Nadimpally and M. Zaki

Gene Ranking Using Bootstrapped P-values

16

S. N. Mukherjee, P. Skykacek, S. J. Roberts, S. J. Gurr

Improving Classification of Microarray Data using Prototype-based Feature Selection

23

B. Hanczar, M. Courtine, A. Benis, C. Hennegar, K. Clément, J.-D. Zucker

Supervised Analysis When the Number of Candidate Features (p) Greatly Exceeds The Number of Cases (n)

31

R. Simon

Differential Expression, Class Discovery and Class Prediction using S-PLUS and S+ArrayAnalyzer

38

M. O'Connell

Machine Learning Methods Applied to DNA Microarray Data Can Improve the Diagnosis of Cancer

48

E. Bair and R. Tibshirani

Loss-Based Estimation with Cross-Validation: Applications to Microarray Data Analysis

56

S. Dudoit, M. J. van der Laan, S. Keles, A. M. Molinaro, S. E. Sinisi, S. L. Teng

Classification of Heterogeneous Gene Expression Data

69

B. Y. M. Fung and V. T. Y. Ng

Toward Interactive Exploration of Gene Expression Patterns

79

D. Jiang, J. Pei, A. Zhang

Graphical Modeling Based Gene Interaction Analysis for Microarray Data

91

X. Wu, Y. Ye, L. Zhang

Meta-Clustering of Gene Expression Data and Literature-based Information

101

P. Glenisson, J. Mathys, B. De Moor

Mining Biologically Active Patterns in Metabolic Pathways using Microarray Expression Profiles

113

H. Mamitsuka, Y. Okuno, A. Yamaguchi

Statistical Methods for Joint Data Mining of Gene Expression and DNA Sequence Data

122

M. D. Curran, H. Liu, F. Long, N. Ge

Machine Learning in Low-Level Microarray Analysis

130

B. I. P Rubinstein, J. McAuliffe, S. Cawley, M. Palaniswami, K. Ramamohanarao, T. P. Speed

Contributed Articles

"In vivo" Spam Filtering: A Challenge Problem for KDD

140

T. Fawcett

KDD Cup 2003 Reports

Overview of the KDD Cup 2003

149

J. Gehrke, P. Ginsparg, J. Kleinberg

Citation Prediction Using Time Series Approach KDD Cup 2003 (Task 1)

152

Manjunatha J. N., Sivaramakrishnan K. R., R. K. Pandey, M. Narasimha Murthy

Predicting citation rates for physics papers: Constructing features for an ordered probit model

154

C. Perlich, F. Provost, S. Macskassy

Resolving Citations in Paper Repository

156

S. Sarawagi, S. Srinivasan, V. G. Vinod Vydiswaran, K. Bhudhia

A Data Cleaning Solution by Perl Scripts for the KDD Cup 2003 Task 2

158

M. Cadot and J. di Martino

The Download Estimation Task on KDD Cup 2003

160

J. Brank and J. Leskovec

Model Builder for Predictive Analytics and Fair Isaac's Approach to KDD Cup 2003

163

J. Carleton, D. Hartnett, J. Milana, M. Momma, J. Sirosh, G. Surpi

Exploiting Relational Structure to Understand Publication Patterns in High-Energy Physics

165

A. McGovern, L. Friedland, M. Hay, B. Gallagher, A. Fast, J. Neville, D. Jensen

Using Unsupervised Link Discovery Methods to Find Interesting Facts and Connections in Bibliography Dataset

173

S. Lin and H. Chalupsky

The Myth of the Double-Blind Review? Author Identification Using Only Citations

179

S. Hill and F. Provost

EqRank: A Self-Consistent Equivalence Relation on Graph Vertexes

185

G. Pivovarov, S. Trunov

Panel and Workshop Reports from KDD-2003

Summary from the KDD-03 Panel -- Data Mining: The Next 10 Years

191

U. M. Fayyad, G. Piatetsky-Shapiro, R. Uthurusamy

KDD-2003 Workshop on Data Mining Standards, Services and Platforms (DM-SSP 03)

197

R. Grossman

Data Mining in Bioinformatics: Report on BIOKDD '03

198

M. J. Zaki, J. T. L. Wang, H. T. T. Toivonen

Multirelational Data Mining 2003: Workshop Report

200

S. Dzeroski, L. De Raedt, S. Wrobel

News, Events and Announcements